" Tools to generate automatically high quality sequence by ordering contigs, closing gaps, correcting sequence errors and transferring annotation. With the advent of next generation sequencing a lot of effort was put into developing software for mapping or aligning short reads and perfo...
discoSnps : qualitative de-novo SNP caller. Extremely low memory and time efficient. No reference genome needed. Call both homozygous and heterozygous SNPs.
标签：Population Genomics,Comparative genomics,Barcoding, DNA-Seq, De novo assembly, Genotyping, High-throughput sequencing
Spiral Genetics provides a novel aligner/variant caller, Anchored Assembly, which can detect large structural variations using short read NGS data with unmatched precision.
标签：Alignment, DNA-Seq, Exome and Whole genome variant detection, De novo Assembly,Genomic Assembly, Mapping,Quality Control, Read alignment, Reference assembly,Resequencing, SNP discovery,Sequence analysis, Whole Genome Resequencing